NInstitute of Oceanology,Chinese Academy of Sciences


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Name:(姓名):Jianbo Yuan
Title:(职称):Associate professor
Research Field:(研究领域):Marine invertebrate genomics and evolutionary biology
2018.01 - present, Associated Professor, Institute of Oceanology, Chinese Academy of Sciences.
2017.01 - 2017.12, Assistant Professor, Institute of Oceanology, Chinese Academy of Sciences.
2014.07 - 2017.01, Post doctor, Institute of Oceanology, Chinese Academy of Sciences.
2009.09 - 2014.07, Institute of Oceanology, Chinese Academy of Sciences, Ph. D.
2005.09 - 2009.07, University of Electronic Science and Technology of China, B.Sc.

Research Interests:(研究方向)
1. Research on crustacean genomics
Genome sequencing, assembly, and deep investigation of the economically important shirmps and evolutionary important crustaceans. Comparative genomics analysis to investigate the special genomic characteristics and biological traits.
2. Research on adaptive evolution of marine crustaceans
Investigate on molecular mechanisms of marine crustaceans under different selective pressures, such as low salinity, high temperature, air exposure, and so on. Study on adaptive evolution and convergent evolution of special populations of crustaceans.
3. Functional gene verification
Using bioinformatics to identify the key functional genes associated with special biological traits, and using various experiment methods to verify its function.

Selected Publications:(发表论文、专利、出版书籍等):
(1) Xiaojun Zhang+, Jianbo Yuan+, Yamin Sun+, Shihao Li+, Yi Gao+, Yang Yu+, et al. Penaeid shrimp genome provides insights into benthic adaptation and frequent molting. Nature communications. 2019, 10(356):1-14. (并列一作, JCR一区,IF=12.35)
(2) Jianbo Yuan, Yi Gao, Lina Sun, Songjun Jin, Xiaojun Zhang*, Chengzhang Liu, Fuhua Li and Jianhai Xiang. Wnt signaling pathway linked to intestinal regeneration via evolutionary patterns and gene expression in the sea cucumber Apostichopus japonicus. Frontiers in genetics. 2019, 10(112):1-13. (JCR一区,IF=4.15)
(3) Jianbo Yuan, Yi Gao, Xiaojun Zhang*, Chengzhang Liu, Fuhua Li, Jianhai Xiang*. Genome sequences of marine shrimp Exopalaemon carinicauda Holthuis provide insights into genome size evolution of Caridea. Marine Drugs. 2017, 15(213):1-18. (JCR一区,IF=3.50)
(4) Xiaojun Zhang+, Lina Sun+, Jianbo Yuan+, Yamin Sun+, Yi Gao+, Libin Zhang+, Shihao Li+, Hui Dai, Jean-Franc?ois Hamel, Chengzhang Liu,Yang Yu, Shilin Liu, Wenchao Lin, Kaimin Guo, Songjun Jin, Peng Xu, Kenneth B. Storey, Pin Huan, Tao Zhang, Yi Zhou, Jiquan Zhang, Chenggang Lin,Xiaoni Li, Lili Xing, Da Huo, Mingzhe Sun, Lei Wang, Annie Mercier*, Fuhua Li*, Hongsheng Yang*, Jianhai Xiang*. The sea cucumber genome provides insights into morphological evolution and visceral regeneration. Plos Biology. 2017, 15(10): e2003790. (并列一作,JCR一区,IF=9.79)
(5) Jianbo Yuan, Xiaojun Zhang, Chengzhang Liu, Yang Yu, Jiankai Wei, Fuhua Li and Jianhai Xiang*. Genomic resources and comparative analyses of two economical penaeid shrimp species, Marsupenaeus japonicus and Penaeus monodon. Marine Genomics. 2018, 39:22-25. (JCR三区,IF=1.92)
(6) Jianbo Yuan, Xiaojun Zhang*, Chengzhang Liu, Hu Duan, Fuhua Li, Jianhai Xiang*. Convergent Evolution of the Osmoregulation System in Decapod Shrimps. Marine Biotechnology. 2017, 19:76-88. (JCR一区,IF=3.06)
(7) Jianbo Yuan, Xiaojun Zhang*, Chengzhang Liu, Xiaoqing Sun, Elayaraja Sivaramasamy, Fuhua Li, Jianhai Xiang*. Comparative genomics analysis of decapod shrimps in the Pancrustacea clade. Biochemical Systematics and Ecology. 2016, 64:111-121. (JCR四区,IF=0.93)
(8) Jianbo Yuan, Meiling Yang, Jianfeng Ren, Beide Fu, Yun Yu, Feng Jiang and Xiaojun Zhang*. Analysis of genomic characters reveals that four distinct gene clusters are correlated with different functions in Burkholderia cenocepacia AU 1054. Applied Microbiology and Biotechnology. 2014. 98:361-372. (JCR一区,IF=3.34)
(9) Jianbo Yuan, Xiaojun Zhang*, Chengzhang Liu, Jiankai Wei, Fuhua Li, Jianhai Xiang*. Horizontally transferred genes in the genome of Pacific white shrimp, Litopenaeus vannamei. BMC evolutionary biology. 2013. 13(165):1-16. (JCR二区,IF=3.41)
(10) Jianbo Yuan, Qingming Zhu and Bin Liu*. Phylogenetic and Biological Significance of Evolutionary Elements. PLoS ONE. 2013, 9(1): e84330. (JCR一区,IF=3.53)

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